Subcellular Systems Immunology
Ahmet F. Coskun , Guojun Han , Shih-Yu Chen , Xavier Rovira , Sizun Jiang , Christian Schürch , Yunhao Bai , Chuck Hitzman, and Garry P. Nolan. Three-dimensional imaging mass cytometry at the subcellular scale. Ion beam subcellular tomography, BioRxiv, 2019
Xavier Rovira-Clave, Sizun Jiang, Yunhao Bai, Graham Larson Barlow, Salil Bhate, Ahmet F. Coskun, Guojun Han, Bokai Zhu, Chin-Min Ho, Chuck Hitzman, Shih-Yu Chen, Felice-Alessio Bava, and Garry Nolan. Subcelular localization of drug distribution by super-resolution ion beam imaging, BioRxiv, 2019
Multiplex Assays
Ahmet F. Coskun*, Seda Nur Topkaya, Ali K. Yetisen, and Arif E. Cetin*. Portable Multiplex Optical Assays. Advanced Optical Materials (2018)
Single Cell Systems Biology
- Ahmet F. Coskun*, Umut Eser, and Saiful Islam. Cellular identity at the single-cell level.
Molecular BioSystems (2016) (*Corresponding author)
- Ahmet F. Coskun and Long Cai. Dense transcript profiling in single cells by image correlation decoding.
Nature Methods (2016)
- Eric Lubeck*, Ahmet F. Coskun*, Timur Zhiyentayev, Mubhij Ahmad, and Long Cai. Single-cell in situ RNA profiling by sequential hybridization.
Nature Methods (2014) (*Co-first author)
Molecular Biosensing
- Ahmet F. Coskun Arif E. Cetin, Betty Galarreta, Hatice Altug, and Aydogan Ozcan. Lensfree optofluidic plasmonic sensor for real-time and label-free monitoring of molecular binding events over a wide field-of-view.
Scientific Reports (Nature Publishing Group) 4, 6789 (2014)
- Ahmet F. Coskun*, Arif E. Cetin*, Betty C. Galarreta, Min Huang, David Herman, Aydogan Ozcan, and Hatice Altug. Handheld High-Throughput Plasmonic Biosensor using Computational On-Chip Imaging.
Light Science and Applications (Nature Publishing Group) (2014) (*Co-first author)
- Khademhosseini, Gabriel Biener, Ikbal Sencan, Ting-Wei Su, Ahmet F. Coskun and Aydogan Ozcan. Lensfree Sensing on a Micro-fluidic Chip using Plasmonic Nano-apertures.
Appl. Phys. Lett. (2010)
Lensfree Wide Field Microscopy
- Alon Greenbaum, Wei Luo, Ting-Wei Su, Zoltán Göröcs, Liang Xue, Serhan O Isikman, Ahmet F Coskun, Onur Mudanyali, and Aydogan Ozcan. Imaging without lenses: achievements and remaining challenges of wide-field on-chip microscopy.
Nature Methods (2012)
- Alon Greenbaum, Wei Luo, Bahar Khademhosseini, Ting-Wei Su, Ahmet F. Coskun, and Aydogan Ozcan. Increased space-bandwidth product in pixel super-resolved lensfree on-chip microscopy.
Scientific Reports (Nature Publishing Group) (2013)
- Onur Mudanyanli, Euan McLeod, Wei Luo, Alon Greenbaum, Ahmet F. Coskun, Yves Hennequin, Cedric Allier, Aydogan Ozcan. Wide-field optical detection of nano-particles using on-chip microscopy and self-assembled nano-lenses.
Nature Photonics (2013)
- Ahmet F. Coskun, Ting-Wei Su, Ikbal Sencan, and Aydogan Ozcan. Lensless Fluorescent Microscopy On a Chip.
Journal of Visualized Experiments (JOVE) (2011)
- Ahmet F. Coskun, Ikbal Sencan, Ting-Wei Su, and Aydogan Ozcan. Wide-field Lensless Fluorescent Microscopy Using a Tapered Fiber-optic Faceplate On a Chip.
Analyst (2011)
- Ahmet F. Coskun, Ikbal Sencan, Ting-Wei Su, and Aydogan Ozcan. Lensfree Fluorescent On-Chip Imaging of Transgenic Caenorhabditis elegans Over an Ultra-Wide Field-of-View.
PLoS ONE (2011)
- Ahmet F. Coskun, Ting-wei Su, Ikbal Sencan, and Aydogan Ozcan. Lensfree Fluorescent On-Chip Imaging Using Compressive Sampling.
Optics & Photonics News (2010)
- Waheb Bishara, Ting-Wei Su, Ahmet F. Coskun, and Aydogan Ozcan. Lensfree on-chip microscopy over a wide field-of-view using pixel super-resolution. Opt. Express (2010)
- Ahmet F. Coskun, Ikbal Sencan, Ting-Wei Su, and Aydogan Ozcan. Lensless wide-field fluorescent imaging on a chip using compressive decoding of sparse objects.
Opt. Express (2010)
- Khademhosseini, I. Sencan, G. Biener, T. Su, Ahmet F. Coskun, D. Tseng and A. Ozcan. Lensfree On-chip Imaging using Nano-structured Surfaces.
Applied Physics Letters (2010)
- Ahmet F. Coskun, Ting-Wei Su and Aydogan Ozcan. Wide field-of-view lens-free fluorescent imaging on a chip.
Lab on a Chip (2010)
- Ikbal Sencan, Ahmet F. Coskun, Uzair Sikora, and Aydogan Ozcan. Spectral Demultiplexing in Holographic and Fluorescent On-chip Microscopy.
Scientific Reports (Nature Publishing Group) (2014)
- Serap Altay Arpali, Caglar Arpali , Ahmet F. Coskun , Hsin-Hao Chiang and Aydogan Ozcan. High-throughput screening of large volumes of scattering media using structured illumination and fluorescent on-chip imaging. Lab on a Chip (2012)
- Serhan O. Isikman, Alon Greenbaum, Wei Luo, Ahmet F. Coskun, and Aydogan Ozcan. Giga-Pixel Lensfree Holographic Microscopy and Tomography Using Color Image Sensors.
PLoS ONE (2012)
Lab on a Cellphone
- Stephanie Knowlton, Ashwini Joshi, Philip Syrrist, Ahmet F. Coskun, and Savas Tasoglu. 3D-Printed Smartphone-Based Point of Care tool for Fluorescence and Magnetophoresis-Based Cytometry. Lab on a Chip (2017)
- Ahmet F. Coskun, and Aydogan Ozcan. Computational Imaging, Sensing and Diagnostics for Global Health Applications.
Current Opinion in Biotechnology (2014)
- Ahmet F. Coskun, Richie Nagi, Kavyon Sadeghi, Stephen Phillips and Aydogan Ozcan. Albumin testing in urine using a smart-phone.
Lab on a Chip (2013)
- Ahmet F. Coskun*, Isa Navruz*, Justin Wong, Saqib Mohammad, Derek Tseng, Richie Nagi, Stephen Phillips, and Aydogan Ozcan. Smart-phone based computational microscopy using multi-frame contact imaging on a fiber-optic array.
Lab on a Chip (2013) (*Co-first author)
- Ahmet F. Coskun, Justin Wong, Delaram Khodadadi, Richie Nagi, Andrew Tey, and Aydogan Ozcan. A personalized food allergen testing platform on a cellphone.
Lab on a Chip (2013)
- Hongying Zhu, Sam Mavandadi, Ahmet F. Coskun, Oguzhan Yaglidere, and Aydogan Ozcan. Optofluidic Fluorescent Imaging Cytometry on a Cellphone.
Analytical Chemistry (2011)
Nano-Optics and Laser Materials
- Alphan Sennaroglu, Ahmet F. Coskun, Umit Demirbas. Analysis of solid-state saturable absorbers with temperature dependent absorption cross-sections.
Optical Materials (2009)
- Alper Kiraz, Yasin Karadağ, and Ahmet F. Coskun. Spectral tuning of liquid microdroplets standing on a superhydrophobic surface using electrowetting.
Applied Physics Letters (2008)
Educational Tutorials
- Ali Yetisen, Joe Davis, Ahmet F. Coskun, George Church, and Seok Hyun Yun. Bioart.
Trends in Biotechnology, 33(12), 724-734 (2015)
- Ali Yetisen, Ahmet F. Coskun, Grant England, Sangyeon Cho, Haider Butt, Jonty Hurwitz, Mathias Kolle et al. Art on the Nanoscale and Beyond.
Advanced Materials, 28(9), 1724-1742 (2015)
- Ali Yetisen, Lisa R. Volpatti, Ahmet F. Coskun, Sangyeon Cho, Ehsan Kamrani, Haider Butt, Ali Khademhosseini, and Seok Hyun Yun. Entrepreneurship.
Lab on a Chip, 33(12), 724-734 (2015)